Computational Biophysical Chemistry

Mohammed Gharaibeh

Mohammed Gharaibeh

Associate Professor of Physical Chemistry
Affiliation: The University of Jordan, Amman, Jordan
Education:
* Ph.D., Physical Chemistry, University of Kentucky, USA
* M.S., Physical Chemistry, The University of Jordan, Jordan
* B.S., Chemistry, Yarmouk University, Jordan
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Curriculum Vitae: Download

Academic Biography

Professor Mohammed Gharaibeh is an esteemed academic and researcher specializing in physical chemistry and molecular spectroscopy. He is currently an Associate Professor at the University of Jordan, where he has been a faculty member since 2013.

Professor Gharaibeh earned his Ph.D. in Physical Chemistry from the University of Kentucky in 2012, focusing on the spectroscopic detection and characterization of jet-cooled transient molecules under the supervision of Prof. Dennis J. Clouthier. His academic journey began with a B.S. in Chemistry from Yarmouk University in 1996, followed by an M.S. in Chemistry from the University of Jordan in 1999, where his thesis explored the chemical modification of Jordanian kaolinite using crown ethers.

Throughout his career, Prof. Gharaibeh has contributed significantly to the field of chemistry through teaching, research, and scholarly collaboration. His professional experiences include a Fulbright Visiting Scholar position at the University of Kentucky in 2017, where he furthered his post-doctoral research. He has also held roles as a research and development chemist in the pharmaceutical industry and as a teaching and research assistant at both the University of Kentucky and the University of Jordan.

Professor Gharaibeh’s contributions have been recognized with several prestigious awards and grants, including the Fulbright Visiting Scholar Award (2017) and a full tuition and stipend fellowship from the University of Jordan (2010–2012). His dedication to advancing chemical sciences is evident in his commitment to mentoring students, conducting impactful research, and fostering international academic collaborations.

Beyond his academic achievements, Prof. Gharaibeh is passionate about exploring innovative spectroscopic techniques and their applications in understanding complex molecular systems. His work continues to inspire and shape the next generation of chemists.

Research Interest

Research Areas:

Professor Mohammed A. Gharaibeh’s research is rooted in physical chemistry, with a particular focus on the spectroscopy of intermediate molecules, theoretical and computational chemistry, and the Renner-Teller effect in triatomic molecules. His work bridges experimental and theoretical approaches to unravel the complexities of molecular behavior and dynamics, contributing significantly to the fields of molecular spectroscopy and computational modeling.

A key area of Prof. Gharaibeh’s research involves the spectroscopic detection and characterization of transient molecules. His work, such as the detection of stannylidene (H₂C=Sn and D₂C=Sn) molecules in the gas phase, exemplifies his expertise in advanced spectroscopic techniques and his ability to explore the intricate details of molecular structures and reactions. His investigations into the Renner-Teller effect in triatomic molecules have furthered understanding of vibronic interactions and energy level splitting, providing insights into the fundamental properties of these systems.

Professor Gharaibeh is also deeply engaged in theoretical and computational chemistry, employing methods such as density functional theory (DFT) and time-dependent DFT (TD-DFT) to predict and analyze molecular properties. His studies on BODIPY dyes, including their photophysical properties and excitation energies, have practical implications for designing efficient dye-sensitized solar cells (DSSCs).

His interdisciplinary research extends to molecular docking and drug discovery, as demonstrated by his contributions to studies on the inhibitory effects of natural compounds on key biological targets. For instance, his collaborative work on Ephedra alte and its inhibitory effects on inflammatory markers showcases the application of computational techniques in identifying potential therapeutic agents. Additionally, his exploration of the structural and dynamical impacts of mutations in the p53 protein highlights his contributions to computational biochemistry and cancer research.

Professor Gharaibeh’s extensive publication record reflects his commitment to advancing knowledge across multiple domains of chemistry. His work has not only deepened the scientific understanding of molecular systems but also opened avenues for practical applications in materials science, drug discovery, and spectroscopy.

Publications

Peer-Reviewed Articles

  1. Salman HA, Yaakop AS, Aladaileh S, Mustafa M, Gharaibeh M, Kahar UM. Inhibitory effects of Ephedra alte on IL-6, hybrid TLR4, TNF-α, IL-1β, and extracted TLR4 receptors: in silico molecular docking. Heliyon. 2022 Dec 30;9(1):e12730. https://doi.org/10.1016/j.heliyon.2022.e12730
  2. W. Helal, A. Marashdeh, Q. Alkhatib, H. Qashmar, M. Gharaibeh, A. T. Afaneh. Tuning the photophysical properties of BODIPY dyes used in DSSCs as predicted by double-hybrid TD-DFT: The role of the methyl substituents. Int. J. Quantum Chem. 2022, 122(24), e27000. https://doi.org/10.1002/qua.27000
  3. Smith TC, Gharaibeh M, Clouthier DJ. Spectroscopic detection of the stannylidene (H2C=Sn and D2C=Sn) molecule in the gas phase. J Chem Phys. 2022 Nov 28;157(20):204306. https://doi.org/10.1063/5.0127449
  4. Mustafa, Morad; Gharaibeh, Mohammad. Most Probable Druggable Pockets in Mutant p53-Arg175His Clusters Extracted from Gaussian Accelerated Molecular Dynamics Simulations. Protein Journal. 2022; 41:27–43. https://doi.org/10.1007/s10930-022-10041-0
  5. Wissam Helal, Qabas Alkhatib, Mohammed Gharaibeh. Can time-dependent double hybrid density functionals accurately predict electronic excitation energies of BODIPY compounds? Computational and Theoretical Chemistry. Volume 1207, 2022, 113531. https://doi.org/10.1016/j.comptc.2021.113531
  6. Mustafa, Morad; Wedian, Fadel; Aldal’in, Hammad K.; Al-Mazaideh, Ghassab M.; Mahmoud, Sabry Younis; Farrag, Eman Saleh; Gharaibeh, Mohammed; Hijawi, Thameen; Al-Rimawi, Fuad; Abbadi, Jehad; Shalayel, Mohammed Helmy Faris; Siddique, Nadeem A.; Salman, Haya Ayyal; Huneif, Mohammed Ayed. The efficiency of some active ingredients of Arum Palaestina as inhibitors to 3CLpro and Nsp15 proteins. Acta Poloniae Pharmaceutica – Drug Research. 2021;78(5):657–665.
  7. Mohammed Gharaibeh, Bayenah Al-Shami, Wissam Helal. Electronic spectrum of boron dichloride. theoretical study of vibronic levels of the ground and first excited states. Journal of Molecular Structure. Volume 1224, 2021, 129206. https://doi.org/10.1016/j.molstruc.2020.129206
  8. Deeb Taher, Sami Klaib, Firas F. Awwadi, Wissam Helal, Mohammed Gharaibeh, Gerd Rheinwald, Tobias Rüffer, Heinrich Lang. Ti(ƞ5-1-SiMe3-C9H6)(Cl)2(OR): Structure and bonding. Inorganica Chimica Acta. Volume 477, 2018, Pages 270-276. https://doi.org/10.1016/j.ica.2018.03.003
  9. Gharaibeh M, Clouthier DJ, Tarroni R. An experimental and theoretical study of the Ã(2)A(″)Π-X̃(2)A(‘) band system of the jet-cooled HBBr/DBBr free radical. J Chem Phys. 2016 Jun 21;144(23):234309. https://doi.org/10.1063/1.4953771
  10. Sunahori FX, Gharaibeh M, Clouthier DJ, Tarroni R. BH2 revisited: New, extensive measurements of laser-induced fluorescence transitions and ab initio calculations of near-spectroscopic accuracy. J Chem Phys. 2015 May 7;142(17):174302. https://doi.org/10.1063/1.4919094
  11. Gharaibeh MA, Nagarajan R, Clouthier DJ, Tarroni R. An experimental and theoretical study of the electronic spectrum of the HBCl free radical. J Chem Phys. 2015 Jan 7;142(1):014305. https://doi.org/10.1063/1.4904892

Conferences, Symposiums, and Workshops

  1. Mohammed Gharaibeh, The 16th Jordanian Chemistry Conference-Five Decades In Chemistry, The University of Jordan, Amman, Jordan, 2019.

  2. Tony Smith; Mohammed Gharaibeh; Dennis Clouthier, International Symposium on Molecular Spectroscopy, Urbana-Champaign, Illinois, USA, 2018.

  3. Mohammed Gharaibeh, The 1st International Conference on Natural Products and Drug Discovery, The University of Jordan, Amman, Jordan, 2015.

  4. Mohammed Gharaibeh; Fumie X Sunahori; Dennis Clouthier, 69th International Symposium on Molecular Spectroscopy, Columbus, Ohio, USA, 2014.

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